BioImage Information Index

Biii is a website for organizing bioimage analysis resources. We manually edit following pages, for you to search tools, workflows and functions for bioimage analysis:

Please enjoy!



maree's picture

Pyxit object classification prediction

Package/Library: 
Cytomine
maree's picture

SLDC

Anonymous's picture

TrakEM2

Anonymous's picture

ImageJ/QuimP

kota's picture

NeurphologyJ

Perrine's picture

ImageJFX

NOT TESTED YET: ImageJFX is a software built on Fiji which aims are providing a user interface easing the construction of workflows, and integrating help and tutorial messages. Its purpose is to decrease the learning curves of scientist and speed up common operations. Available in beta version on registration for now (December 2016).

GiovanniCardone's picture

imageHTS

imageHTS is an R/Bioconductor package dedicated to the analysis of high-throughput microscopy-based screens. The package provides a modular and extensible framework to segment cells, extract quantitative cell features, predict cell types and browse screen data through web interfaces. Designed to operate in distributed environments, imageHTS provides a standardized access to remote data and facilitates the dissemination of high-throughput microscopy-based datasets.

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