2D tracking using KNIME

czhang's picture
Workflow Author: 

Juergen Reymann

Workflow Language: 
2D time series
Input data type: 
2D time series image
Output data type: 
tracked object ID image, KNIME result table with object statistics
Example Image URL: 
Comment / Instructions: 

This simple KNIME workflow solution tracks 2D objects/cells in time series. After a few intensity based preprocessing steps, objects/cells are segmented first, then it uses Fiji TrackMate LAP method for the tracking task.

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