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FISH-quant

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Workflow URL: 
Workflow Author: 

Florian Mueller

Workflow Language: 
Dimension: 
3D
Input data type: 
3D image
Output data type: 
CSV
Comment / Instructions: 

Matlab toolbox to analyze single molecule mRNA FISH data. Allows counting the number of mature and nascent transcripts in 3D images. See [1].

Following toolboxes are required: - Optimization toolbox - Statistics toolbox - Image processing toolbox - (Optional) Parallel processing toolbox


References

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