Software / Libraries


KNOSSOS - 3D image visualization and annotation tool

czhang's picture

It is a tool to visualize and annotate volume image data of electron microscopy. Users can annotate objects (e.g. neurons) and skeleton structures. It provides the ability to overlaying the image data with user annotations, representing the spatial structure and the connectivity of labeled objects, and displaying a three dimensional model of it.
It can be extended by plugins written in python.
A similar, web-based implementation is being developed at webknossos.info.
Example datasets are also available.

License: 
unknown
Platform(s): 
multiplatform
Target Audience(s): 
Developer, Analyst, User
Type(s): 
application
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Author(s): 
Max Planck Institute for Medical Research in Heidelberg, Germany