segmentation

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Nico's picture

Aphelion

A commercial image analysis software.
It's interface allows to easily perform measurements and image analysis. Your actions can be recorded and a macro (in a basic script language) can then be created. Almost no knowledge in programming is needed. You can also use python.
A SDK is also available to develop stand alone applications in c++.
Additional modules allow to use specific operations (3D operators...

Sebastien's picture

Tissue Cell Segmentation

Workflow Language: 
ImageJ Macro Language
marielaureb's picture

Blob segmentation

Workflow Language: 
Java
kota's picture

Vaa3D

Vaa3D [1, 2, 3] is a handy, fast, and versatile 3D/4D/5D Image Visualization & Analysis System for Bioimages & Surface Objects. It also provides many unique functions ... It is also Open Source, supports a very simple and powerful plugin interface and thus can be extended & enhanced easily...

kota's picture

ITK-SNAP

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kota's picture

Metamorph

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kota's picture

OpenCV

OpenCV is released under a BSD license and hence it’s free for both academic and commercial use. It has C++, C, Python and Java interfaces and supports Windows, Linux, Mac OS, iOS and Android. OpenCV was designed for computational efficiency and with a strong focus on real-time applications. Written in optimized C/C++, the library can take advantage of multi-core processing. Adopted all around the world, OpenCV has more than 47 thousand people of user community and estimated number of downloads exceeding 6 million.

kota's picture

Volocity

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