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Skeletonize

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ImageJ
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Microtubule Length Analysis

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PINK

Pink is an generic image processing library with inclination towards morphology, discrete topology, skeletonization and image segmentation. Operators support 2D, 3D and 4D images where there exist algorithms for such extensions. There is no practical limitation about the image site. It is suitable for general image processing or as a preprocessing / postprocessing toolset for specific image processing problems.
There are several successfull applications of PINK in the fields of Biology, Material Sciences, Education and Image Processing Research.

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distmap

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Strahler Analysis

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Distance Map Transform

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Skeletonize3D

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