Workflows

Bio-image analysis workflows
Workflow Dependencies Language Ratingsort ascending Updated
Pixel Classification using ilastik ilastik, VIGRA C++, Python
5
Average: 5 (2 votes)
12/08/2014 - 17:43
Golgi Segmentation by Active Mask framework ImageJ, Matlab Image Processing Toolbox Java, MATLAB
4
Average: 4 (1 vote)
01/11/2015 - 21:09
Multi Kymograph Fiji, ImageJ ImageJ Macro Language, Java
4
Average: 4 (1 vote)
04/29/2016 - 13:01
FibrilTool ImageJ ImageJ Macro Language
4
Average: 4 (1 vote)
04/13/2016 - 14:01
Organise Image Data using OMERO OMERO Human Language
4
Average: 4 (1 vote)
12/15/2014 - 23:10
Automatic 2D/3D Tracking using ilastik ilastik, VIGRA C++, Python
4
Average: 4 (1 vote)
12/08/2014 - 16:19
MicrobeTracker MATLAB MATLAB
4
Average: 4 (1 vote)
12/15/2014 - 23:35
Microtubule end tracking Fiji, ImageJ Java
3
Average: 3 (1 vote)
12/09/2014 - 12:04
3D intensity profile Fiji, ImageJ Javascript
3
Average: 3 (1 vote)
12/09/2014 - 13:08
Count Cells Manually ImageJ Human Language
3
Average: 3 (1 vote)
12/15/2014 - 23:20
3D Object Segmentation and Tracking Volocity Human Language
3
Average: 3 (1 vote)
01/03/2015 - 04:25
3D object based colocalization using KNIME KNIME Image Processing and Analysis KNIME Workflow
0
No votes yet
01/08/2015 - 13:59
Blob segmentation Fiji Java
0
No votes yet
12/08/2014 - 17:10
Quantifying staining in tissue sections ImageJ Java
0
No votes yet
12/09/2014 - 11:07
Automated cell tracking and analysis in phase-contrast microscopy ImageJ Java
0
No votes yet
12/09/2014 - 11:55
Measure distance of organelles from nucleus in 3D Imaris, MATLAB
0
No votes yet
12/09/2014 - 09:32
CytooChip Analysis Fiji, ImageJ ImageJ Macro Language
0
No votes yet
12/09/2014 - 14:32
Colony Blob Count Tool Fiji, ImageJ ImageJ Macro Language
0
No votes yet
12/09/2014 - 16:46
Automated velocity mapping of migrating cell populations (AVeMap) MATLAB MATLAB
0
No votes yet
02/27/2015 - 13:41
Tissue Cell Segmentation Fiji, ImageJ ImageJ Macro Language
0
No votes yet
12/09/2014 - 14:12

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